| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1552262 = | 78 (1.020) | 3 (0.040) | 3/90 | NT | 4.4% | intergenic (+132/+52) | torI/dsdC | response regulator inhibitor for tor operon/DNA‑binding transcriptional dual regulator |
| ? | minE | 1552283 = | 60 (0.880) | intergenic (+153/+31) | torI/dsdC | response regulator inhibitor for tor operon/DNA‑binding transcriptional dual regulator | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACAGGTAAAAACCACTTCATAATGAATAAAACCACGAGTTCCTGGTGTGCCTTATTCGGCCTGCTAGTTCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1552335‑1552262‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaatAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGATAAT > minE/1552283‑1552352 ACAGGTAAAAACCACTTCATAATGAATAAAACCACGAGTTCCTGGTGTGCCTTATTCGGCCTGCTAGTTCG < 1:1922040/71‑1 GTAAAAACCACTTCATAATGAATAAAACCACGAGTTCCTGGTGTGCCTTATTCAGCCTGCTAGTTC < 1:3304239/66‑1 AAAAACCACTTCATAATGAATAAAACCACGAGTTCCTGGTGTGCCTTATTCGGCCTGCTAGTTCGAAT > 1:4658201/1‑68 CATAATGAATAAAACCACGAGTTCCTGGTGTGCCTTATTCGGCCTGCTAGTTCGA > 1:4449774/1‑55 TAAAACCACGAGTTCCTGGTGTGCCTTATTCGGCCT‑CTAGTTCGA < 1:4647149/45‑1 TATTCGGCCTGCTAGTTCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTT > 1:1194180/1‑69 TTCGGCCTGCTAGTTCGAATAAGGCACACCAGGAACTCGTGGTTT < 1:674329/45‑1 CTAGTTCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCT > 1:240833/1‑69 CGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGA < 1:2696636/71‑1 CGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGC > 1:3111560/1‑67 CGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGC > 1:3114597/1‑67 CGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGC > 1:784277/1‑67 GAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGAT < 1:2326232/71‑1 GAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGAT < 1:1181045/71‑1 GAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGA > 1:4467787/1‑70 GAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGA > 1:1891776/1‑70 GAATAAGGCACACCAGGAACTCGTGGTTTTATTCA > 1:1997589/1‑35 TAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGATAAT < 1:431179/71‑1 TAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGATAA > 1:3539423/1‑70 TAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTAC > 1:3790224/1‑50 TAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTAC > 1:990801/1‑50 TAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTT > 1:2108711/1‑47 ACAGGTAAAAACCACTTCATAATGAATAAAACCACGAGTTCCTGGTGTGCCTTATTCGGCCTGCTAGTTCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1552335‑1552262‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaatAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAGATAAT > minE/1552283‑1552352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |