New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 1622833 = | 84 (1.100) | 3 (0.040) | 3/94 | NT | 3.3% | coding (1813/2280 nt) | maeB | fused malic enzyme predicted oxidoreductase and predicted phosphotransacetylase |
? | minE | 1622860 = | 97 (1.350) | coding (1786/2280 nt) | maeB | fused malic enzyme predicted oxidoreductase and predicted phosphotransacetylase | |||||
Rejected: Frequency below/above cutoff threshold. |
GGTGCCATGAACGCGCTGCTGCTGCCGAGTGGTAACACCTTTATTGCCGATACATATGTTAATGATGAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1622905‑1622833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGGCACCTGCGGTGTGAACGCCATCGCGA > minE/1622860‑1622927 GGTGCCATGAACGCGCTGCTGCTGCCGAGTGGTAACACCTTTATTGCCGATACATATGTTAATGATGAACC < 1:326528/71‑1 ATGAACGCGCTCCTGCTGCCGAGTGGTAACACCTTTATTGCCGATACATATGTTAATGATGAACCG < 1:4613108/66‑1 TATGTTAATGATGAACCGGCAATAAAGGTGTTACCACTCG < 1:384415/40‑1 TGTTAATGATGAACCGGCAATAAAGGTGTTACCACTCGGC > 1:2805922/1‑40 TTAATGATGAACCGGCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGGCACCTGCGGTGTG < 1:3402831/70‑1 GGCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGGCACCTGCGGTGTGAACGCCATCGCGA > 1:231946/1‑70 GGCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGGCAC > 1:1543368/1‑47 GGCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGG < 1:2520779/44‑1 GGCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGG < 1:750900/44‑1 GCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGGCACCTGCGGTGTGAACGCCATCG > 1:1523685/1‑66 GGTGCCATGAACGCGCTGCTGCTGCCGAGTGGTAACACCTTTATTGCCGATACATATGTTAATGATGAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1622905‑1622833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggCAATAAAGGTGTTACCACTCGGCAGCAGCAGCGCGTTCATGGCACCTGCGGTGTGAACGCCATCGCGA > minE/1622860‑1622927 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |