| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1804393 | 417 (5.480) | 3 (0.040) | 3/88 | NT | 0.79% | coding (459/531 nt) | mprA | DNA‑binding transcriptional regulator |
| ? | minE | = 1804405 | 388 (5.790) | coding (471/531 nt) | mprA | DNA‑binding transcriptional regulator | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 101 total aligned reads displayed.
TTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1804319‑1804393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcaaTTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGGCAG < minE/1804405‑1804336 TTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCG < 1:32404/70‑1 tCCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAG < 1:2261724/69‑1 ACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAG < 1:3034675/70‑1 ACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAG > 1:4630719/1‑70 ACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCG > 1:4283156/1‑68 ACCACCGCAGCATAACTGCATGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAG > 1:3879590/1‑70 CCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:2983287/71‑1 CCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:429300/71‑1 CCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:426392/71‑1 CCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:162991/71‑1 CCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:1777612/71‑1 CCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGC < 1:4482234/70‑1 CCACCGCAGCATAACTGCCTGCAT‑AACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:672008/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:4250918/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:3040655/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:2769890/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:3833130/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:2755639/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:1004157/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:2737818/71‑1 CACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA > 1:1036856/1‑70 CGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:3037977/67‑1 AGCATAACTGCCTGCATCAACTCTGGTCCGCTCTCAGCACAACAGAAAAAGATCAGCTCGAGC < 1:429082/63‑1 AGCATAACTGCCTGCATCAACTCTGGTCCGCCCTCAGCACAACAGAAAAAGATCAGCTCGAGC < 1:3046894/63‑1 CATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:2681270/63‑1 TAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:3478705/60‑1 TAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:990145/60‑1 TAACTCCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:3440496/60‑1 AACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:2929919/59‑1 ACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGC > 1:259462/1‑57 ACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGC > 1:491343/1‑57 ACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGA > 1:2980413/1‑55 TGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGATCAA < 1:589461/57‑1 CTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAATTTGCGGGTGATTTGCT < 1:3067240/71‑1 ATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGC < 1:3569461/48‑1 TCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAATTTGCGGGTGATTTGCTC < 1:38936/67‑1 TCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:1539242/48‑1 TCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGA < 1:4336819/45‑1 AACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:1220373/46‑1 AACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAG > 1:839332/1‑44 TCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAATTTGCGGGTG < 1:2591240/54‑1 TCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGC > 1:3351855/1‑42 GGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:3216258/40‑1 TCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:3533711/38‑1 TCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:2792336/38‑1 TCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA < 1:2803833/38‑1 CCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA > 1:3114324/1‑37 CCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA > 1:3522554/1‑37 CCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCA > 1:1736493/1‑37 CGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:3262499/37‑1 GCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:289032/36‑1 GCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA < 1:3234707/36‑1 gtGAGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCT < 1:4305089/48‑1 GAGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCT < 1:4003627/48‑1 GAGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGT < 1:2198402/45‑1 GAGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGT < 1:2558855/45‑1 AGCAATTTGCGTGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAG > 1:232708/1‑71 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAG < 1:3554264/71‑1 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAG > 1:574183/1‑71 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAG < 1:4258107/71‑1 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAG > 1:1530413/1‑71 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTT < 1:2540628/64‑1 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTT < 1:4313921/64‑1 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGG < 1:757804/55‑1 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGC < 1:2195040/51‑1 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTT < 1:1502507/37‑1 AGCAATTTGCGGGTGATTTGCTCGAGCTGATCTTT < 1:1495253/35‑1 GCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:3534135/1‑71 GCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG < 1:345202/71‑1 GCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:1661453/1‑71 GCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG < 1:2673517/71‑1 GCAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:4276350/1‑71 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGGC < 1:1287920/71‑1 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:4522180/1‑70 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:2137076/1‑70 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:1514979/1‑70 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:2731738/1‑70 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAG > 1:2826236/1‑60 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCA > 1:2230585/1‑57 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCT < 1:1394913/45‑1 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTG > 1:918181/1‑43 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTG > 1:669908/1‑43 CAATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTG < 1:4193852/38‑1 AATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:3974206/1‑69 AATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGG > 1:3337621/1‑69 AATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGA > 1:894149/1‑53 AATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTT > 1:506594/1‑39 AATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGT < 1:3524973/38‑1 ATTTGCGGGTGATTTGCTCGAGCTTATCTTTTTCTGTTGTGCTGAGCGCt < 1:6923/50‑2 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGGCAG > 1:911115/1‑71 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGGCAG < 1:193091/71‑1 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGAT < 1:1726915/63‑1 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGAT < 1:204104/63‑1 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGA > 1:2854587/1‑62 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTT < 1:2671350/60‑1 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCG < 1:2809048/48‑1 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGC > 1:1820021/1‑42 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTT > 1:1573377/1‑38 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTG < 1:78973/36‑1 ATTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTG < 1:3903605/36‑1 TTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1804319‑1804393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcaaTTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTGATGCAGGCAG < minE/1804405‑1804336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |