| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2636839 | 70 (0.920) | 3 (0.040) | 3/94 | NT | 4.5% | coding (562/888 nt) | ugpA | glycerol‑3‑phosphate transporter subunit |
| ? | minE | = 2636860 | 62 (0.870) | coding (583/888 nt) | ugpA | glycerol‑3‑phosphate transporter subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2636767‑2636839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAAGAACAGGAAGTTG < minE/2636860‑2636793 GCCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTC > 1:1301786/1‑71 CCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCG < 1:4404064/71‑1 CCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCG < 1:2613198/71‑1 CTCAGTGTGGAAGCAAATCAGCTACAACTTTCTGTTCTTCTATGCCGCGCTGCAATCCATCCCCCGTTCGT > 1:3352587/1‑71 CTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGT > 1:2576671/1‑71 GCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGTCGATGGCTGCGG > 1:685956/1‑71 AACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGTCGATGGCTGCGGCTTCGATCAACGA < 1:3910170/71‑1 CCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGTCGATGGCTGCGGCTTCGATCAACGAACG < 1:2926470/69‑1 GTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTC < 1:4273687/36‑1 TTCTTCTATGCCGCGTTGCAATCCATTCCCCGTTCGT < 1:947097/37‑1 CGTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAAG < 1:1603691/59‑1 CGTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAAG < 1:1229445/59‑1 CGTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAA < 1:4236662/58‑1 CGTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAA < 1:581054/58‑1 GTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAAGAACAGGAAGTTG > 1:3925552/1‑70 GTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCA > 1:4280673/1‑52 GTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCA > 1:4398955/1‑52 GTCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGAT > 1:1174382/1‑40 TCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAAGAACAGGAAGTTG > 1:3001616/1‑69 TCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAAGAA < 1:3312571/59‑1 TCGATGGCTGAGGCTTCGATCAAAGAACGGGGAATGGATTGCAGCGCGGCATAGAAGAACAGGAAGTTG > 1:1626029/1‑69 GCCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2636767‑2636839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtCGATGGCTGCGGCTTCGATCAACGAACGGGGAATGGATTGCAGCGCGGCATAGAAGAACAGGAAGTTG < minE/2636860‑2636793 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |