| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2639793 = | 106 (1.390) | 5 (0.070) | 3/90 | NT | 5.1% | coding (718/744 nt) | ugpQ | glycerophosphodiester phosphodiesterase, cytosolic |
| ? | minE | 2639818 = | 91 (1.330) | coding (743/744 nt) coding (429/441 nt) |
ugpQ yhhA |
glycerophosphodiester phosphodiesterase, cytosolic conserved hypothetical protein |
|||||
CATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2639866‑2639793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaatAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGCATGTCGCCGTTTCTCCTCTCCGG > minE/2639818‑2639886 CATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACC < 1:3572220/71‑1 CTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT > 1:1487935/1‑70 CTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT > 1:3587217/1‑70 CTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT > 1:2909636/1‑70 CTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTAGTGGGCCGTAAAGTTCGGACCAAT > 1:4306928/1‑70 AATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT < 1:555909/67‑1 CACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT > 1:2595177/1‑56 ACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT < 1:3581461/55‑1 ACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGAC > 1:2175141/1‑51 TGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT < 1:4323460/44‑1 TTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT < 1:3464024/39‑1 ATTGGGCCGTAAAGTTCGGACCAATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAG > 1:1851762/1‑70 ATTGGGCCGTAAAGTTCGGACCAATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAG > 1:4120440/1‑70 ATTGGGCCGTAAAGTTCGGACCAATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAG > 1:4654696/1‑70 TTGGGCCGTAAAGTTCGGACCAATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGC < 1:3280573/70‑1 TGGGCCGTAAAGTTCGGACCAATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCT > 1:3570580/1‑56 CAATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGCATGTCGCCGTTTCTCCTCTCC > 1:3109561/1‑71 CAATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGCATGTCGCCGTTTCTCCTCTCC > 1:4488994/1‑71 AATAGTTTTCAACGGAATGTCAGTCTGCGGCGTGCTGG > 1:756847/1‑38 AATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGCATGTCGCCGTT < 1:1024570/60‑1 ATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGCATGTCGCCGTTTCTCCTCTCCGG > 1:4434032/1‑71 ATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCT < 1:1709813/35‑1 ATAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCT < 1:1820885/35‑1 TAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGCA > 1:954192/1‑48 TAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGA > 1:637211/1‑41 CATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2639866‑2639793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaatAGTTTTCAACGGAATGTCAGGCTGCGGCGTGCTGGGCTGATTCAGCATGTCGCCGTTTCTCCTCTCCGG > minE/2639818‑2639886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |