| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2647437 | 99 (1.300) | 4 (0.060) | 3/90 | NT | 4.3% | intergenic (+117/‑156) | asd/glgB | aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding/1,4‑alpha‑glucan branching enzyme |
| ? | minE | = 2647463 | 88 (1.280) | intergenic (+143/‑130) | asd/glgB | aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding/1,4‑alpha‑glucan branching enzyme | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCGTAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2647363‑2647437‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaggCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAAT < minE/2647463‑2647397 TGCGTAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTT < 1:469560/71‑1TGCGTAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTT < 1:4032762/71‑1 CGTAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTT > 1:3345471/1‑69 TAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTAAGG > 1:3064976/1‑71 TAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTAA < 1:1970380/69‑1 TAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTAA < 1:331341/69‑1 TACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTT < 1:4631750/64‑1 TACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTT < 1:377205/64‑1 GGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTT > 1:2873254/1‑60 TCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTAAGG > 1:3836048/1‑46 CATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTA < 1:2341742/42‑1 TGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTAAG < 1:1795010/42‑1 CCGGGAGTTAAATAGAGCATTGGCTATTCTTTAAGGCTGTGAATACTCATG < 1:1511415/51‑1 CGGGAGTTAAATAGAGCATTGGCTATTCTGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAA < 1:3102177/71‑1 CGGGAGTTAAATAGAGCATTGGCTATTCTGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAA < 1:3096595/71‑1 TTAAATAGAGCATTGGCTATTCTTTAAGGCTGTGAATACTC < 1:790900/41‑1 AAGGCTGTGAATACTCATGTATTCAGCAACCCTTAAAGAATAGCAAATGCTCTATTTAAATACCGGTAA < 1:1141051/69‑1 AGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAAT < 1:330088/70‑1 GCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCC < 1:1904509/42‑1 TGCGTAATACAGGAGTAAGCGCAGATGTTTCATGATTTACCGGGAGTTAAATAGAGCATTGGCTATTCTTTAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2647363‑2647437‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaggCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAAT < minE/2647463‑2647397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |