| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 215622 | 31 (0.410) | 196 (5.590) +TTTAATATCAGTAAACCGGACATAACC |
50/46 | NT | 89.2% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | minE | 2705182 = | 72 (0.950) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 497 total aligned reads displayed.
GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGAAA > minE/215553‑215692 | gaTTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATaa < 1:3493610/70‑1 (MQ=255) ttGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt < 1:2788110‑M1/71‑4 (MQ=255) ttGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAt > 1:2200897‑M1/1‑68 (MQ=255) gCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa > 1:3847141‑M1/1‑66 (MQ=255) gCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttta < 1:2690039‑M1/70‑5 (MQ=255) aGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaata < 1:4552620‑M1/71‑8 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatat < 1:4238653‑M1/71‑9 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatat > 1:3714369‑M1/1‑63 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatat < 1:4400009‑M1/71‑9 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaata > 1:2047386‑M1/1‑63 (MQ=255) cTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt < 1:3968872‑M1/65‑4 (MQ=255) cATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcag > 1:1577160‑M1/1‑60 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaa < 1:1263464‑M1/71‑16 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaa > 1:2177665‑M1/1‑56 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaa < 1:3561264‑M1/70‑15 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAt > 1:3132238‑M1/1‑56 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATAcc > 1:3644594/1‑61 (MQ=255) aGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaac > 1:1529318‑M1/1‑55 (MQ=255) aGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatat < 1:3883486‑M1/63‑9 (MQ=255) ccGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgg < 1:248193‑M1/71‑20 (MQ=255) gTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATaaa > 1:4262917/1‑51 (MQ=255) gTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTaaa < 1:2725643/71‑1 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagta < 1:750320‑M1/62‑14 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtt < 1:2389988‑M1/51‑3 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat > 1:1011030‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat > 1:2103495‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat > 1:1934179‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat > 1:4277517‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat > 1:529267‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTaaaaa > 1:1001852/1‑70 (MQ=255) gATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacata < 1:2015944‑M1/69‑25 (MQ=255) gATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTaaaaa < 1:2591649/68‑1 (MQ=255) aTCTGGTGCAGAACAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgg < 1:1662529‑M1/63‑20 (MQ=255) cTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataaccca > 1:2252058‑M1/1‑42 (MQ=255) cTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataaccca > 1:1604783‑M1/1‑42 (MQ=255) cTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataaccc > 1:343149‑M1/1‑42 (MQ=255) tGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaa < 1:406122‑M1/55‑15 (MQ=255) gTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataaccca < 1:2929980‑M1/68‑30 (MQ=255) tGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatg > 1:3814684‑M1/1‑38 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaa < 1:3610720‑M1/71‑38 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaa < 1:632649‑M1/71‑38 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaa > 1:1228973‑M1/1‑34 (MQ=255) gaagaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaa < 1:1909045‑M1/49‑16 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaa < 1:3383419‑M1/71‑40 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaa < 1:1862921‑M1/70‑39 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaat > 1:2118811‑M1/1‑31 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaac > 1:1553265‑M1/1‑31 (MQ=255) aaaGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat < 1:4351667‑M1/53‑24 (MQ=255) aaaGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatca > 1:3106196‑M1/1‑30 (MQ=255) aaGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaa > 1:1794790‑M1/1‑29 (MQ=255) aaGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGAtttt < 1:1701170/71‑1 (MQ=255) aGGCGGAAGTTGCCTTTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgc > 1:121655‑M1/1‑28 (MQ=255) gCGGAAGTTGCCTCTGGCGAGCATAAtataatatcagtaaaccggacataacccatgaagaaaaatcgcga > 1:2405048‑M1/1‑26 (MQ=255) cGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat > 1:3192121‑M1/1‑25 (MQ=255) ggAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctt > 1:2866086‑M1/1‑24 (MQ=255) gAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac < 1:3692849‑M1/44‑22 (MQ=255) aaGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttt < 1:654084‑M1/71‑50 (MQ=255) aGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttt > 1:2351554‑M1/1‑21 (MQ=255) aGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTgcagca > 1:2986661/1‑70 (MQ=255) gTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttttt < 1:2820900‑M1/71‑52 (MQ=255) gTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttttt < 1:322178‑M1/71‑52 (MQ=255) gTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataaccca < 1:25399‑M1/49‑30 (MQ=255) ttGCCTCTTGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg < 1:3015446‑M1/71‑53 (MQ=255) ttGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg < 1:1366382‑M1/71‑53 (MQ=255) ttGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctt < 1:1116140‑M1/66‑48 (MQ=255) tGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg > 1:2003703‑M1/1‑18 (MQ=255) tGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg > 1:1179465‑M1/1‑18 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:2967672‑M1/70‑54 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:2443253‑M1/70‑54 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:967424‑M1/70‑54 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:4596081‑M1/70‑54 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:4521373‑M1/70‑54 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg > 1:2633144‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg > 1:1200555‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttattt > 1:1449726‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaa > 1:4085888‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACg < 1:601968/70‑1 (MQ=255) ccTCTGTCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttt > 1:2907026‑M1/1‑16 (MQ=255) ccTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaag < 1:941377‑M1/71‑56 (MQ=255) ctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgg > 1:1764106‑M1/1‑13 (MQ=255) ctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttt > 1:3341188‑M1/1‑13 (MQ=255) tGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtg < 1:3736585‑M1/69‑58 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggca < 1:1062534‑M1/71‑62 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggca < 1:4671485‑M1/71‑62 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggc < 1:3764032‑M1/70‑61 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtggg < 1:4022001‑M1/69‑60 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtggg < 1:3928175‑M1/69‑60 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtggg < 1:3078861‑M1/69‑60 (MQ=255) gCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCaaaa < 1:786440/71‑1 (MQ=255) aGCATAAtttaatatcagtaatccggacataacccatgaagaaaaatcgcgcttt < 1:90200‑M1/55‑49 (MQ=255) tAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggc > 1:1331643‑M1/1‑3 (MQ=255) aatttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcagggggc > 1:4480836‑M1/1‑2 (MQ=255) aatttaatatcagtaaaccggacataacccatgaagaaa < 1:3295883‑M1/39‑38 (MQ=255) aaaTACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATgag > 1:2315458/1‑69 (MQ=255) atttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcagggggcaag > 1:1478398‑M1/1‑1 (MQ=255) atttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcagggggcaag < 1:810270‑M1/71‑71 (MQ=255) atttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcagggggcaag < 1:4181954‑M1/71‑71 (MQ=255) atttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcaggg > 1:4311757‑M1/1‑1 (MQ=255) atttaatatcagtaaaccggacataacccatgaagaaaaat > 1:701617‑M1/1‑1 (MQ=255) aaTACCTGTAAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGaa < 1:4001945/70‑1 (MQ=255) | GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGAAA > minE/215553‑215692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |