Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 2,797,686 A→G 5.1% L357L (TTA→TTG dinF → DNA‑damage‑inducible SOS response protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE2,797,6860AG 5.1% 324.0 / 6.3 116L357L (TTA→TTGdinFDNA‑damage‑inducible SOS response protein
Reads supporting (aligned to +/- strand):  ref base A (49/61);  new base G (2/4);  total (51/65)
Fisher's exact test for biased strand distribution p-value = 6.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 121 total aligned reads displayed.

CAGTCGGGGATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCGGTGG  >  minE/2797618‑2797756
                                                                    |                                                                      
cAGTCGGGGATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACt                                                                      <  1:843825/71‑1 (MQ=255)
  gTCGGGGATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGa                                                                    <  1:3698106/71‑1 (MQ=255)
     ggggATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGAcgt                                                                 >  1:2543010/1‑71 (MQ=255)
      gggATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTAc                                                                       <  1:722613/64‑1 (MQ=255)
       ggATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGAcgtcg                                                               <  1:237560/71‑1 (MQ=255)
        gATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGTTGGGGAACACATCATTGCGTTACTGAcgtcgt                                                              >  1:810792/1‑71 (MQ=255)
        gATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTg                                                                     >  1:3356289/1‑64 (MQ=255)
        gATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGAcgtcgt                                                              <  1:57946/71‑1 (MQ=255)
        gATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGAcgtcgt                                                              <  1:1840794/71‑1 (MQ=255)
         aTCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGtt                                                             <  1:923067/71‑1 (MQ=255)
            gTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAAc                                                          >  1:2504516/1‑71 (MQ=255)
             tAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAAcc                                                         >  1:4093387/1‑71 (MQ=255)
             tAGCGTTACTGTTTTAGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGAcgtc                                                                <  1:4132769/64‑1 (MQ=255)
               gCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGAcgtcgt                                                              >  1:1017029/1‑64 (MQ=255)
               gCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCa                                                       <  1:2233636/71‑1 (MQ=255)
                cGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCa                                                       <  1:1093882/70‑1 (MQ=255)
                 gTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAAcc                                                         >  1:3835932/1‑67 (MQ=255)
                 gTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGa                                                     <  1:487272/71‑1 (MQ=255)
                  ttACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGAt                                                    <  1:1679453/71‑1 (MQ=255)
                   tACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGAtt                                                   >  1:1298561/1‑71 (MQ=255)
                    aCTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGAtt                                                   <  1:1981191/70‑1 (MQ=255)
                    aCTGTTTTCGGTGGTTTATTTGCTGGCT‑‑GGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTcag                                                >  1:4330107/1‑71 (MQ=255)
                     cTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTca                                                 <  1:4329445/71‑1 (MQ=255)
                      tGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGtt                                                             <  1:2201484/58‑1 (MQ=255)
                        ttttCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTAc                                                                       >  1:1123534/1‑46 (MQ=255)
                        ttttCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTAc                                                                       >  1:3543946/1‑46 (MQ=255)
                        ttttCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGAcgtcg                                                               >  1:23769/1‑54 (MQ=255)
                        ttttCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGa                                                     <  1:1136429/64‑1 (MQ=255)
                        ttttCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTcagc                                               <  1:3439404/70‑1 (MQ=255)
                        ttttCGGTGGTTTATTTGCTGGCTGGGGAACACATAATTGCGTTACTGACGTCGTTAACCCAGATTcagca                                              <  1:2424452/71‑1 (MQ=255)
                          ttCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCagcagc                                            >  1:3611607/1‑71 (MQ=255)
                          ttCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCagcagc                                            >  1:3967236/1‑71 (MQ=255)
                           tCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGtt                                                             <  1:389593/53‑1 (MQ=255)
                            cGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTca                                                 >  1:1508348/1‑64 (MQ=255)
                            cGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgct                                           <  1:3850054/70‑1 (MQ=255)
                             ggtggtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctgg                                         >  1:2373284/1‑71 (MQ=255)
                             ggtggtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctgg                                         <  1:390955/71‑1 (MQ=255)
                             ggtggtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctg                                          <  1:1710916/70‑1 (MQ=255)
                             ggtggtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctg                                          <  1:4416063/70‑1 (MQ=255)
                               tggtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGtt                                                             <  1:1004924/49‑1 (MQ=255)
                               tggtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctggct                                       <  1:3750381/71‑1 (MQ=255)
                               tggtTTATTTGCTGGCAGGGGAACACATCATTGCGTTGCTGACGTCGTTAACCCAGATTCAGCAgctggct                                       >  1:457122/1‑71 (MQ=255)
                                 gtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTaa                                                           <  1:1534979/49‑1 (MQ=255)
                                 gtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctggctg                                      <  1:886723/70‑1 (MQ=255)
                                 gtTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGa                                     >  1:253049/1‑71 (MQ=255)
                                  tttATTTGCTGGCTGGGGAACACATCATTGCGTTAGTGAcgtc                                                                <  1:591728/43‑1 (MQ=255)
                                  tttATTTGCTGGCTGGGGAACACATCATTGCGTTACt                                                                      <  1:1559786/37‑1 (MQ=255)
                                  tttATTTGCTGGCTGGGGAACACATCATTGCGTTACTg                                                                     <  1:795621/38‑1 (MQ=255)
                                  tttATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTc                                                  <  1:3595303/57‑1 (MQ=255)
                                   ttATTTGCTGGCTGGGGAACACATCATTGCGTTACTGa                                                                    >  1:3358000/1‑38 (MQ=255)
                                   ttATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAAcc                                                         <  1:4144157/49‑1 (MQ=255)
                                   ttATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAAcc                                                         <  1:1181020/49‑1 (MQ=255)
                                   ttATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGAcc                                   >  1:720709/1‑71 (MQ=255)
                                    tATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCagcagc                                            >  1:2370493/1‑61 (MQ=255)
                                    tATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGa                                     >  1:4544239/1‑68 (MQ=255)
                                     aTTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGCCCGc                                 >  1:276576/1‑71 (MQ=255)
                                     aTTTGCTGGCTGGGGAAAACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCg                                  <  1:3562592/70‑1 (MQ=255)
                                      tttGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGAcc                                   <  1:1535823/68‑1 (MQ=255)
                                       ttactggctggGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCta                               >  1:2012664/4‑71 (MQ=255)
                                       ttGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCta                               >  1:1508941/1‑71 (MQ=255)
                                       ttGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCt                                <  1:2640739/70‑1 (MQ=255)
                                        tGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTaa                                                           >  1:1993531/1‑42 (MQ=255)
                                        tGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCta                               <  1:3027513/70‑1 (MQ=255)
                                         gctggctgGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatc                             >  1:2260311/1‑71 (MQ=255)
                                         gctggctgGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatc                             >  1:1794974/1‑71 (MQ=255)
                                          ctggctggGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatc                             <  1:573483/70‑1 (MQ=255)
                                           tggctggGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCt                                <  1:3152686/66‑1 (MQ=255)
                                            ggctggGGAACACATCATTGCGTTACTGACGTCGTTAACCAAGATTCAGCAGCTGGCTGACCGCtatctta                          >  1:813774/1‑71 (MQ=255)
                                             gctggGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatctta                          <  1:1731185/70‑1 (MQ=255)
                                             gctggGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatctt                           <  1:4463293/69‑1 (MQ=255)
                                             gctggGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatctt                           <  1:4163421/69‑1 (MQ=255)
                                             gctggGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatctt                           <  1:3390678/69‑1 (MQ=255)
                                                 gggAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTgg                     >  1:4628377/1‑71 (MQ=255)
                                                    aaCACATCATTGCGTTACTGACGTCGTTAACCCAGAtt                                                   <  1:4266610/38‑1 (MQ=255)
                                                     acacATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAgg                 >  1:4565969/1‑71 (MQ=255)
                                                      cacaTCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctggctg                                      <  1:759191/49‑1 (MQ=255)
                                                      cacaTCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGt                >  1:1412722/1‑71 (MQ=255)
                                                       acaTCATTGCGTTGCTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTg               <  1:855133/71‑1 (MQ=255)
                                                        catcatTGCGTTACTGACGTCGTTAACCCAGATTcagc                                               <  1:90256/38‑1 (MQ=255)
                                                        catcatTGCGTTACTGACGTCGTTAACCCAGATTCAGCAgctggctg                                      <  1:1491992/47‑1 (MQ=255)
                                                        catcatTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGa              >  1:618374/1‑71 (MQ=255)
                                                         atcatTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGAc                                    >  1:343032/1‑48 (MQ=255)
                                                         atcatTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatc                             >  1:1733958/1‑55 (MQ=255)
                                                         atcatTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGAt             >  1:2762354/1‑71 (MQ=255)
                                                         atcatTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGAt             >  1:877268/1‑71 (MQ=255)
                                                           catTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGAttt           >  1:1381265/1‑71 (MQ=255)
                                                            atTGCGTTACTGAGGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAg                  >  1:402126/1‑63 (MQ=255)
                                                            atTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCta                               >  1:3958850/1‑50 (MQ=255)
                                                            atTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGAtttt          <  1:2376983/71‑1 (MQ=255)
                                                            atTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGAtttt          >  1:3528728/1‑71 (MQ=255)
                                                            atTGCGTTACTGACGTAGTTAACCCAGATTCAGCAGCTGGCTGACCGCtatctt                           <  1:2887492/54‑1 (MQ=255)
                                                               gCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATGTTATCTGGCAGGTGATTTTGcc       >  1:4548819/1‑71 (MQ=255)
                                                               gCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGcc       >  1:2219074/1‑71 (MQ=255)
                                                                cGTTGCTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCg      <  1:2759706/71‑1 (MQ=255)
                                                                  ttACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCggt    <  1:2888463/71‑1 (MQ=255)
                                                                   tACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCggtg   >  1:3934854/1‑71 (MQ=255)
                                                                   tACTGACGTCGTTAACCCAGATTAAGCAGCTGGCTGACCGCta                               >  1:2153397/1‑43 (MQ=255)
                                                                    aCTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCggtgg  >  1:2704962/1‑71 (MQ=255)
                                                                    aCTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCggtg   >  1:650579/1‑70 (MQ=255)
                                                                    aCTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCggtg   <  1:322874/70‑1 (MQ=255)
                                                                    |                                                                      
CAGTCGGGGATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCGGTGG  >  minE/2797618‑2797756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: