Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1447572	1447576	5	59 [0]	[0] 5	rcsC/atoS	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN/sensory histidine kinase in two‑component regulatory system with AtoC

TTCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATACC  >  minE/1447501‑1447571                                                                       | ttCTCTCTTCTCTGGAATATGATACCCCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1108085/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:528671/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2397326/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2412131/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2624379/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2656982/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2673477/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2773674/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2811360/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:316914/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:326995/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:340809/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:352159/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:38196/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:479096/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2343660/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:565789/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:592494/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:599867/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:652357/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:695098/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:699656/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:722028/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:732104/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:733806/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:866390/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:885148/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:956195/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:960706/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1613270/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1117899/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1157876/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:117599/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:117955/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1205817/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1250825/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1256552/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1346972/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:141486/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1418679/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:14205/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1518537/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1568730/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2294404/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1858746/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1867852/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1881367/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1922689/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:1977084/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2050955/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2066706/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2087538/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2091538/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:20979/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2101713/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2176129/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:2197643/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTATGATAATCGTCATATAcc  >  1:2847381/1‑71 (MQ=255) ttCTCTCTTCTCTGGAATATGATACACAGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATAcc  >  1:80237/1‑71 (MQ=255)                                                                       | TTCTCTCTTCTCTGGAATATGATACACCGCCGAGAAATCATCACCTTAACCTCTGATAATCGTCATATACC  >  minE/1447501‑1447571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑