Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1917177	1917212	36	55 [0]	[1] 43	mutH	methyl‑directed mismatch repair protein

TCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGGAAG  >  minE/1917106‑1917176                                                                       | tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:2813572/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1010660/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1897176/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1905601/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1957254/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1968659/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1988740/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:2099293/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:2226633/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:2240339/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:2498380/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:2708675/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:2801883/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1788395/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:302760/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:36766/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:381875/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:572530/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:628543/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:646814/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:684869/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:70158/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:828596/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:861003/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:955321/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:984374/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1334759/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1024607/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1064567/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:109581/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1112848/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1113043/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1131646/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1135261/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1138451/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1158058/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1230729/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1263766/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1319935/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1722223/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1344781/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1366606/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:138694/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1464064/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1531965/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1537308/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1569793/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1582219/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1600686/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1665436/71‑1 (MQ=255) tCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1698356/71‑1 (MQ=255) tCGCGTTGGAGCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:833671/71‑1 (MQ=255)             aCCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:729498/59‑1 (MQ=255)              ccGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGgaag  <  1:1945709/58‑1 (MQ=255)                            cccGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGTgaag  <  1:1700951/44‑1 (MQ=255)                                                                       | TCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGGAAG  >  minE/1917106‑1917176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑