Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2241873	2241909	37	44 [0]	[0] 5	hupA	HU, DNA‑binding transcriptional regulator, alpha subunit

CGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACAAA  >  minE/2241806‑2241872                                                                   | cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCTTTGCCAGAAACaaa  >  1:238462/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACgaa  >  1:141464/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2872922/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2177199/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2255986/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2320108/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2402564/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2461982/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2466256/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2477919/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2703121/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:280802/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2855538/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:110646/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2893408/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2907215/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:300545/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:410973/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:789372/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:805245/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:81544/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:832165/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:983692/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1599291/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1070689/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1112774/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:116137/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1234921/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1402258/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1435300/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1467589/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1470758/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1481343/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1499519/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1774292/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1816427/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1832997/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:186653/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1871030/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1904817/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:1918678/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:193958/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACaaa  >  1:2013645/1‑67 (MQ=255) cGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGACTTGCCAGAAACaaa  >  1:2131311/1‑67 (MQ=255)                                                                   | CGTTAAAACTGTTCACTGCCACGCAATCTTACTTAACTGCGTCTTTCAGTGCCTTGCCAGAAACAAA  >  minE/2241806‑2241872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑