Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2341943	2341961	19	25 [0]	[0] 32	glnA	glutamine synthetase

GGTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCGCGTGCG  >  minE/2341872‑2341942                                                                       | ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2140851/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:637110/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2813948/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:675641/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2676381/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:265644/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2576771/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:254793/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2482247/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2452440/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1945076/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1891834/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:901779/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1841375/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1595304/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:139440/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:122495/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1138086/71‑1 (MQ=255) ggTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1016953/71‑1 (MQ=255)  gTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:951712/70‑1 (MQ=255)  gTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:566032/70‑1 (MQ=255)  gTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2871402/70‑1 (MQ=255)  gTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:2773040/70‑1 (MQ=255)  gTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1891685/70‑1 (MQ=255)  gTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCgcgtgcg  <  1:1122627/70‑1 (MQ=255)                                                                       | GGTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCGCGTGCG  >  minE/2341872‑2341942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑