Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2499081	2499089	9	36 [0]	[0] 13	ilvB	acetolactate synthase I, large subunit

AAGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCATT  >  minE/2499010‑2499080                                                                       | aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGGGCTGATCCATGTGCGCAtt  <  1:1232317/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2209216/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:750098/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:57659/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:779295/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:448611/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:317909/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:280689/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2725092/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:857827/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2666546/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2493785/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2451944/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1039570/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2433358/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2318401/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2197316/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2133240/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1988250/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1732937/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1731847/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1706492/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:157239/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1570782/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1469303/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1381380/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:1166122/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:115936/71‑1 (MQ=255) aaGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:105427/71‑1 (MQ=255)  aGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2444376/70‑1 (MQ=255)  aGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:652151/70‑1 (MQ=255)  aGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:537459/70‑1 (MQ=255)         ccGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:739356/63‑1 (MQ=255)              ggCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:994090/58‑1 (MQ=255)                                catcaATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:745152/40‑1 (MQ=255)                                catcaATCGCCCTGGCCCGGCGCTGATCCATGTGCGCAtt  <  1:2681867/40‑1 (MQ=255)                                                                       | AAGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCATT  >  minE/2499010‑2499080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑