Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	301134	301207	74	46 [0]	[0] 15	glnK	nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB

ATAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCA  >  minE/301085‑301133                                                 | aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2845266/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1036470/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2215163/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2232598/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2244164/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2336647/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2384899/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2431700/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2468516/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:267555/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2758034/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2783936/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2185973/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:296564/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:338522/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:456492/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:504655/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:583546/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:678596/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:684974/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:772421/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:963972/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:981984/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1583757/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1038448/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1066823/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:117827/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1239003/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1241802/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1289709/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1379022/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1396744/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1469678/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1505029/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1531554/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:2167847/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1688663/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:169170/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1839183/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1854107/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1895559/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:1904726/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:214375/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCa  >  1:216329/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTACCTTCCa  >  1:2290607/1‑49 (MQ=255) aTAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGATATCTTCCa  >  1:2075011/1‑49 (MQ=255)                                                 | ATAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCA  >  minE/301085‑301133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑