Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1146897	1146908	12	13 [0]	[0] 3	chbR	DNA‑binding transcriptional dual regulator

CCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCT  >  minE/1146909‑1146954 |                                              ccTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCt  <  1:2044843/46‑1 (MQ=255) ccTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCt  <  1:2861843/46‑1 (MQ=255) ccTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCt  <  1:547086/46‑1 (MQ=255) |                                              CCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCT  >  minE/1146909‑1146954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑