Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2141469	2141475	7	10 [0]	[0] 42	nusA	transcription termination/antitermination L factor

CCAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAA  >  minE/2141476‑2141545 |                                                                      ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGTAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:666400/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCTTCGATGTCGAGATATTTGGTGaa  <  1:861716/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTg    <  1:1372255/68‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTg    <  1:1938280/68‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:429417/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2514049/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2525283/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2628096/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2675242/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2693816/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2871562/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:321152/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:338405/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:399721/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2456844/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:45390/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:495639/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:712242/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:717559/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:761547/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:887692/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:924687/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1899049/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1047620/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1133730/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1230260/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1393771/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1450543/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1587532/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1608441/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1757782/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1807104/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2496117/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:191768/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:192778/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2023727/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2201442/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2242142/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2288735/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2296103/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:2448332/70‑1 (MQ=255) ccAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGaa  <  1:1001828/70‑1 (MQ=255) |                                                                      CCAGCGTCGAGAAGCCTTCTTCTACCAGAACAGTCGCGAAGTCTTCGTCGATGTCGAGATATTTGGTGAA  >  minE/2141476‑2141545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑