Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2654084	2654102	19	29 [0]	[0] 32	glgA	glycogen synthase

CAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCT  >  minE/2654103‑2654173 |                                                                       cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATGGCATTATGGGCGGCGCGGACGTCAtt    >  1:1783093/1‑69 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGcgcg             >  1:1698402/1‑60 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTc       >  1:604764/1‑66 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCa      >  1:2004834/1‑67 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTc   >  1:1107341/1‑70 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTc   >  1:2391969/1‑70 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTc   >  1:633106/1‑70 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:619023/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:569275/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:853246/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:2823994/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:2589832/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:2508149/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:2470172/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1093408/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:863698/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:2287372/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:2061318/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:205969/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:2047491/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1900359/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1876674/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1844482/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1813292/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1801804/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1751051/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:159137/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1530834/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1517189/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1222912/1‑71 (MQ=255) cAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCt  >  1:1175206/1‑71 (MQ=255) cAGGTGGCCGTTCAGATTGGCTATCACGAAGCATTTtcgca                                >  1:2225585/1‑41 (MQ=255) |                                                                       CAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCT  >  minE/2654103‑2654173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑