Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2852112	2852133	22	8 [0]	[0] 39	[rsgA]	[rsgA]

AGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGTTT  >  minE/2852134‑2852204 |                                                                       aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGTATACGGTGATAGTTTTCGAAACGGGttt  >  1:554421/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATa                   >  1:111175/1‑54 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGaaa         >  1:2071983/1‑64 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGaaa         >  1:2066422/1‑64 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGaa          >  1:2817968/1‑63 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2381836/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:981219/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2419793/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2496046/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2515592/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2852946/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2888390/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:385300/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:391333/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:39364/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:494071/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:53397/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:60493/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:715172/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:933901/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:96865/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1851277/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1138016/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1343581/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1416458/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1558383/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1560080/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1609971/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:1655469/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2352089/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2020710/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2168607/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2178016/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2196259/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2226866/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2240442/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGttt  >  1:2329155/1‑71 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGtt   >  1:1663931/1‑70 (MQ=255) aGAAAAGTTTTTACGCGTTTTTACCTCCGCCATGca                                     >  1:1110260/1‑35 (MQ=38) |                                                                       AGAAAAGTTTTTACGCGTTTTTACCTGCGCCATGCTTTCCAGAATACGGTGATAGTTTTCGAAACGGGTTT  >  minE/2852134‑2852204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑