Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	246731	246794	64	5 [1]	[0] 54	phoR	sensory histidine kinase in two‑component regulatory system with PhoB

ACTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTC  >  minE/246795‑246864 |                                                                      aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAAcgc                                  >  1:2740517/1‑38 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAAcg                                   >  1:409262/1‑37 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGAtt                            >  1:2737198/1‑44 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAAt           >  1:2738433/1‑61 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCt   >  1:1648386/1‑69 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:492860/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2748162/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2762752/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:27662/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2874153/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2882618/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2918315/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:308073/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:319474/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:413450/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:98540/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:514005/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:538872/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:589214/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:592985/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:606111/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:616838/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:638090/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:688589/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:70324/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:864338/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:96136/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1010508/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2075527/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:107873/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1198408/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1224936/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1248911/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1430363/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1516488/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1694409/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1816485/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2020274/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2723972/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2102542/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2102863/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2200736/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2237401/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2335793/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2401939/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2599711/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2652724/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2688495/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2690070/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGAGCTc  >  1:2664663/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTATCTCGCCCGCTCAATCTGGTGCTc  >  1:1419859/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAATATATGAAAACGCGTGATTTTTCTAGCCCGCTCAATCTGGTGCTc  >  1:672084/1‑70 (MQ=255) aCTGCGTTACCCGGAGTTTACGCAAAATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:1867825/1‑70 (MQ=255) aCTGCGTAACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTc  >  1:2182064/1‑70 (MQ=255) |                                                                      ACTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTC  >  minE/246795‑246864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑