| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 350,530 | G→A | 100% | intergenic (+127/+72) | glxR → / ← purK | tartronate semialdehyde reductase, NADH‑dependent/N5‑carboxyaminoimidazole ribonucleotide synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 350,530 | 0 | G | A | 100.0% | 159.9 / NA | 47 | intergenic (+127/+72) | glxR/purK | tartronate semialdehyde reductase, NADH‑dependent/N5‑carboxyaminoimidazole ribonucleotide synthase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (0/47); total (0/47) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCG > minE/350498‑350568 | tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:283278/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2058044/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2060535/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2069805/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2110156/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2302362/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2322801/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2411254/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2523744/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:259198/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:259386/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2749795/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2042886/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:290235/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:425917/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:568325/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:578335/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:67164/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:771921/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:829531/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:872232/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:918922/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:930424/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:940879/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1620091/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1071274/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1135679/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1169642/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1184397/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:122127/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1247441/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1391927/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1416874/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:145269/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1600789/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1604160/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1013303/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:165192/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1665046/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1676872/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1726930/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1815881/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1965787/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1969198/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:1992102/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2021356/71‑1 (MQ=255)tGCCTGATGCGATGCTTGACGCATCTTATCAGACCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCg < 1:2021517/71‑1 (MQ=255) | TGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAATGGGTACCGGATCGGTAGGCCGGATAAGGCG > minE/350498‑350568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |