Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | minE | 813,910 | A→G | 100% | C60C (TGT→TGC) | prsA ← | phosphoribosylpyrophosphate synthase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | minE | 813,910 | 0 | A | G | 100.0% | 111.8 / NA | 31 | C60C (TGT→TGC) | prsA | phosphoribosylpyrophosphate synthase |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (31/0); total (31/0) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
TGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTG > minE/813894‑813963 | tGTCGTTAGTAGGGGTGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1270909/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGAGTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1460426/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATcacaac > 1:77359/1‑48 (MQ=39) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTaa > 1:949052/1‑66 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAAttt > 1:2799938/1‑69 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:240175/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2069035/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2459244/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2581116/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2772381/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:496973/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:614475/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:616052/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:669318/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:681686/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:701377/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:941349/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2305866/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1070392/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2057819/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2049762/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2038999/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:2032378/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1799142/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1614039/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1497858/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1485/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:135558/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:12914/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1271376/1‑70 (MQ=255) tGTCGTTAGTAGGGGCGCAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTg > 1:1077529/1‑70 (MQ=255) | TGTCGTTAGTAGGGGCACAAGTGGACTGGATGATGAAAATATCACCACCGCGTACATTTTCATTAATTTG > minE/813894‑813963 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |