Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 1,839,652 A→G 100% N96Y (AAT→TAC surE ← broad specificity 5'(3')‑nucleotidase and polyphosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE1,839,6520AG90.3% 116.0 / 4.7 41N96Y (AAT→TACsurEbroad specificity 5'(3')‑nucleotidase and polyphosphatase
Reads supporting (aligned to +/- strand):  ref base A (4/0);  new base G (37/0);  total (41/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.14e-01
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

CCGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGATTCGGCCCGGCGTTAATTCCGGACACAACAATGTCCGGGCGCGGACGCA  >  minE/1839582‑1839701
                                                                      |                                                 
ccGGAAAACCTATATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2771422/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2249776/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1831643/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1861568/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1872506/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1945548/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1954238/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1968830/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:61801/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:592301/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2141029/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2144425/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:58924/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:9950/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1002071/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2534657/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2624366/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2640896/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:454419/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2739761/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2791070/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:289028/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:2913488/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1390823/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1128559/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1142803/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1189890/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1225138/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1227195/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:865106/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1079662/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1253143/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:137838/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:822311/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:930471/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1637692/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1464833/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:162843/71‑1 (MQ=255)
ccGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:759496/71‑1 (MQ=255)
 cGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1166421/70‑1 (MQ=255)
 cGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:428874/70‑1 (MQ=255)
 cGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1502420/70‑1 (MQ=255)
 cGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:245465/70‑1 (MQ=255)
 cGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1592879/70‑1 (MQ=255)
    aaaaCCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:682592/67‑1 (MQ=255)
            aaTGACGGCCTTCCATCTCGGCGGCTACCGTACCGTAATAAATAACATCATCCCCCAGa                                                   <  1:2160232/59‑1 (MQ=255)
             aTGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGa                                                   <  1:1999821/58‑1 (MQ=255)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACggac                                            >  1:313088/1‑60 (MQ=255)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:385486/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2440906/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:531719/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:369871/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:352423/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:491495/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:531685/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:732422/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:832202/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:793995/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:667644/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:674761/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:707593/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2898645/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1013374/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1015487/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1230920/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1420748/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1446500/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1463794/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1500446/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1727627/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1791579/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1802972/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:1998827/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:207786/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2139602/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2166431/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2319703/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2433079/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:263682/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2790844/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2815567/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGtatt                                   >  1:2861496/1‑68 (MQ=37)
                aCGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGGTACGGACCCGCGta                                     >  1:516430/1‑68 (MQ=38)
                aCGGCCTTCCATCGCGGCGGCTACAGTACCGGAATAAATAACATCATCCCCCAGGTACgga                                             >  1:2672474/1‑60 (MQ=255)
                                                 ataaataaCATCATCCCCCAGATTCGGCCCGGCGTTAATTCCg                              >  1:209232/1‑43 (MQ=255)
                                                 ataaataaCATCATCCCCCAGATTCGGCCCGGCGTTAATTCCGGACACAACAATGTCCGGGCGCGGACGCa  >  1:713543/1‑71 (MQ=255)
                                                 ataaataaCATCATCCCCCAGATTCGGCCCGGCGTTAATTCCGGACACAACAATGTCCGGGCGCGGACGCa  >  1:519465/1‑71 (MQ=255)
                                                 ataaataaCATCATCCCCCAGATTCGGCCCGGCGTTAATTCCGGACACAACAATGTCCGGGCGCGGACGCa  >  1:292564/1‑71 (MQ=255)
                                                                      |                                                 
CCGGAAAACCTAAATGACGGCCTTCCATCGCGGCGGCTACCGTACCGGAATAAATAACATCATCCCCCAGATTCGGCCCGGCGTTAATTCCGGACACAACAATGTCCGGGCGCGGACGCA  >  minE/1839582‑1839701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: