Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 2,386,361 C→A 100% L189I (CTA→ATA)  metR → DNA‑binding transcriptional activator, homocysteine‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE2,386,3610CA100.0% 39.0 / NA 13L189I (CTA→ATA) metRDNA‑binding transcriptional activator, homocysteine‑binding
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (0/13);  total (0/13)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

ACGCGAATTACACCGGAAGATCTCGCCAGCGAGACGCTATTAATTTATCCGGTGCAGCGTAGTCGACTGG  >  minE/2386325‑2386394
                                    |                                 
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:1038575/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:1089169/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:1732674/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:1798/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:1904773/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:1954299/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:2396288/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:2430357/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:2570417/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:2673396/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:414657/70‑1 (MQ=255)
aCGCGAATTACACCGGAAGATCTCGCCAGCGAGACGATATTAATTTATCCGGTGCAGCGTAGTCGACTgg  <  1:893526/70‑1 (MQ=255)
                               agaCGATTTTAATTTTTCCGGTGCAGCGTAGTCGACTgg  <  1:1110681/39‑1 (MQ=25)
                                    |                                 
ACGCGAATTACACCGGAAGATCTCGCCAGCGAGACGCTATTAATTTATCCGGTGCAGCGTAGTCGACTGG  >  minE/2386325‑2386394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: