| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 2,864,584 | C→T | 100% | A295A (GCC→GCT) | hflK → | modulator for HflB protease specific for phage lambda cII repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 2,864,584 | 0 | C | T | 100.0% | 61.9 / NA | 20 | A295A (GCC→GCT) | hflK | modulator for HflB protease specific for phage lambda cII repressor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (2/18); total (2/18) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TCCTCGAAGAGGCGCGTGCGTACAAGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAG > minE/2864556‑2864648 | tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2669386/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:898463/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:86323/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:793022/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:746437/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:579873/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2806352/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2761657/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:1220428/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2616646/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2534090/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2353729/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2194556/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:209272/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:2016339/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:1874758/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:1759176/43‑1 (MQ=255)tCCTCGAAGAGGCGCGTGCGTACAAGGCTCAGACCATCCTGGa < 1:1372367/43‑1 (MQ=255) cAAGGCTCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAg > 1:497326/1‑71 (MQ=255) cAAGGCTCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAg > 1:811807/1‑71 (MQ=255) | TCCTCGAAGAGGCGCGTGCGTACAAGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAG > minE/2864556‑2864648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |