Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 2,927,411 C→A 100% intergenic (‑76/‑191) pepA ← / → yjgP aminopeptidase A, a cyteinylglycinase/conserved inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE2,927,4110CA100.0% 11.2 / NA 5intergenic (‑76/‑191)pepA/yjgPaminopeptidase A, a cyteinylglycinase/conserved inner membrane protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (0/5);  total (0/5)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

GCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTATTACGGCATTGG  >  minE/2927387‑2927456
                        |                                             
gCAAGCTTTCGTAACTCATGTCCGATGTTGCGATGACTTCGTGTTAATCTTAACGTTATTACGGCATTgg  <  1:2057421/70‑1 (MQ=255)
gCAAGCTTTCGTAACTCATGTCCGATGTTGCGATGACTTCGTGTTAATCTTAACGTTATTACGGCATTgg  <  1:2350058/70‑1 (MQ=255)
gCAAGCTTTCGTAACTCATGTCCGATGTTGCGATGACTTCGTGTTAATCTTAACGTTATTACGGCATTgg  <  1:2908226/70‑1 (MQ=255)
gCAAGCTTTCGTAACTCATGTCCGATGTTGCGATGACTTCGTGTTAATCTTAACGTTATTACGGCATTgg  <  1:58894/70‑1 (MQ=255)
gCAAGCTTTCGTAACTCATGTCCGATGTTGCGATGACTTCGTGTTAATCTTAACGTTATTACGGCATTgg  <  1:618325/70‑1 (MQ=255)
                        |                                             
GCAAGCTTTCGTAACTCATGTCCGCTGTTGCGATGACTTCGTGTTAATCTTAACGTTATTACGGCATTGG  >  minE/2927387‑2927456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: