Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2543160	2543242	83	17 [0]	[0] 6	[rfaK]	[rfaK]

TACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCAA  >  minE/2543089‑2543159                                                                       | tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAGTAGTATCCCCaa  <  1:612484/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:424517/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:8873/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:647216/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:561913/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:522524/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:468969/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:161610/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:393352/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:382192/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:305414/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:298928/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:294725/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:281923/71‑1 (MQ=255) tACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:200591/71‑1 (MQ=255)  aCTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:65131/70‑1 (MQ=255)                      gttAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCaa  <  1:562859/49‑1 (MQ=255)                                                                       | TACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCAA  >  minE/2543089‑2543159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑