Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2730599	2730660	62	28 [0]	[0] 3	slyX	conserved hypothetical protein

TGGCGTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCA  >  minE/2730528‑2730598                                                                       | tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGTCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:586875/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTTGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:155715/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:81661/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:116467/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:81620/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:80992/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:75769/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:615465/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:613472/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:610364/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:554301/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:550931/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:539578/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:537406/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:479791/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:423256/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:37579/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:373195/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:283339/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:282107/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:25848/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:221733/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:196398/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:176190/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACCTCTCGGTCAGCAGACGCa  <  1:596577/71‑1 (MQ=255) tggcgTTTCTTCAGCCTGCGACGCGACGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:547918/71‑1 (MQ=255)      tttCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:204229/66‑1 (MQ=255)                             ttCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCa  <  1:185871/43‑1 (MQ=255)                                                                       | TGGCGTTTCTTCAGCCTGCGACGCGATGTTCGACGGCTGGCTGGCTTTTAACTTCTCGGTCAGCAGACGCA  >  minE/2730528‑2730598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑