Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	99310	99464	155	31 [0]	[0] 48	hofC	assembly protein in type IV pilin biogenesis, transmembrane protein

GCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATA  >  minE/99241‑99309                                                                     | gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:382699/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:5964/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:593742/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:610255/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:583529/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:578628/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:570183/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:569307/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:47707/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:476930/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:411653/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:390650/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:28655/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:232210/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:227699/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:199698/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:168377/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:166466/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:629441/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:148241/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:146156/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:117540/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:640390/69‑1 (MQ=255) gCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGCCAGATa  <  1:85577/69‑1 (MQ=255)  cGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:604365/68‑1 (MQ=255)  cGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:650271/68‑1 (MQ=255)  cGTGCACCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:11683/68‑1 (MQ=255)                          cccatcccaCTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:114599/44‑1 (MQ=255)                           ccatcccaCTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:161379/43‑1 (MQ=255)                               cccaCTCATCGCATCGCCTAAATGGAAAATTGGCAGATa  <  1:584560/39‑1 (MQ=255)                                 caCTCATCGCATCTCCTAAATGGAAAATTGGCAGATa  <  1:613178/37‑1 (MQ=255)                                                                     | GCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATA  >  minE/99241‑99309

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑