Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1476962	1477042	81	39 [0]	[1] 9	[inaA]	[inaA]

TACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTC  >  minE/1476891‑1476961                                                                       | tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:631339/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:490919/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:148650/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:551287/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:555737/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:570982/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:589855/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:594299/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:596221/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:539942/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:633931/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:65219/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:65403/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:655800/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:659673/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:70205/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:71033/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:92238/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:207012/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:150787/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:163439/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:169438/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:176161/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:199201/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:201267/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:206805/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:403699/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:220989/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:264757/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:278125/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:300160/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:313279/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:325262/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:379685/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:380960/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGACAGTTAGGCTCTTc  <  1:609678/71‑1 (MQ=255) tacaGCTTTTTGCCGTTGCGCTCAACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:648211/71‑1 (MQ=255) tacaGCTTTTTGCCGGTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:652071/71‑1 (MQ=255)                    gcTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTc  <  1:659616/52‑1 (MQ=255)                                                                       | TACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACCATTACGGCGATAGTTAGGCTCTTC  >  minE/1476891‑1476961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑