Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1812194	1812207	14	71 [0]	[0] 7	csrA	pleiotropic regulatory protein for carbon source metabolism

AGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGAAA  >  minE/1812123‑1812193                                                                       | aGATTAGTAACTGGACTTCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:536169/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:468774/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:550095/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:525265/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:52452/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:520722/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:49091/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:48217/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:471625/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:560026/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:467317/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:466638/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:461070/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:445895/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:43871/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:10071/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:425421/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:434252/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:565931/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:570341/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:573894/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:592687/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:626831/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:628183/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:631423/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:649652/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:660305/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:72951/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:7340/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:76871/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:76894/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:93283/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:96242/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:163271/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:409935/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:259583/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:253145/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:245000/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:238038/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:232143/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:220941/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:217984/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:28551/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:141839/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:138069/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:133043/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:128148/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:125695/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:102568/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:102429/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:101513/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:323085/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:407195/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:400532/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:390278/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:363602/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:361042/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:354700/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:34909/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:332423/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:313660/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:304238/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:296436/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:295501/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:291850/71‑1 (MQ=255) aGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:289096/71‑1 (MQ=255)  gATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:545198/70‑1 (MQ=255)  gATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:606408/70‑1 (MQ=255)   aTTAGTAACTGGACTTCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:648540/69‑1 (MQ=255)                    tgGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGaaa  <  1:487740/52‑1 (MQ=255)                                 ccTGGATACGATTGTAGATCTCTTCACGGTGAACAGaaa  <  1:516812/39‑1 (MQ=38)                                                                       | AGATTAGTAACTGGACTGCTGGGATTTTTCAGCCTGGATACGCTGGTAGATCTCTTCACGGTGAACAGAAA  >  minE/1812123‑1812193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑