Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1815469	1815528	60	42 [0]	[0] 51	recX	regulatory protein for RecA

ACAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTCACA  >  minE/1815398‑1815468                                                                       | aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:534993/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:379025/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:379195/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:39121/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:453844/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:475286/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:479079/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:517208/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:527089/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:170112/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:553570/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:56063/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:564259/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:56443/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:601360/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:629779/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:646900/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:652599/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:376529/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:198666/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:202067/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:219845/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:242968/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:244223/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:249793/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:255617/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:256715/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:279368/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:293343/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:321003/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:325374/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:35083/71‑1 (MQ=255) aCAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:378312/71‑1 (MQ=255) aCAGTTGGCAAAGGTGCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:439328/71‑1 (MQ=255)  cAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATTGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:402478/70‑1 (MQ=255)  cAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:292168/70‑1 (MQ=255)  cAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:427188/70‑1 (MQ=255)  cAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:628301/70‑1 (MQ=255)  cAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:647549/70‑1 (MQ=255)               ttCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:586868/57‑1 (MQ=255)                   ccATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:153596/53‑1 (MQ=255)                                  gCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTcaca  <  1:512406/38‑1 (MQ=255)                                                                       | ACAGTTGGCAAAGGTTCGCCATATTTTCGCGTCGCCTGATCGCGCGCCAGTGCGCACCAGTCGATGTCACA  >  minE/1815398‑1815468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑