Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1826811	1826874	64	44 [0]	[0] 3	mutS	methyl‑directed mismatch repair protein

GAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCT  >  minE/1826741‑1826810                                                                      | gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGGAGTAtct  >  1:576666/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:602257/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:438961/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:470484/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:484608/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:512909/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:546626/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:546735/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:561072/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:580410/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:592513/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:432908/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:602608/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:607216/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:624387/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:632297/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:637175/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:642787/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:80076/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:80446/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:81427/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:90483/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:25884/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:152977/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:158695/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:162041/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:167929/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:189014/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:194555/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:210046/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:234977/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:252788/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:13968/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:302039/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:321698/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:324609/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:326237/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:33415/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:354423/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:395517/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:410626/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:416779/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:42849/1‑70 (MQ=255) gAACCGGACATAACCCCATGAGTGAAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAtct  >  1:18705/1‑70 (MQ=255)                                                                      | GAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCT  >  minE/1826741‑1826810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑