Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1927142	1927489	348	53 [0]	[0] 12	ygeA	predicted racemase

CCAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGCACA  >  minE/1927071‑1927141                                                                       | ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTTCGcaca  <  1:1590/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCTcaca  <  1:322992/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:548041/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:396699/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:103633/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:399950/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:425547/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:43260/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:441068/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:472972/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:4764/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:479149/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:492807/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:502598/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:397115/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:586803/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:599213/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:624632/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:631925/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:641138/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:649932/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:72786/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:78014/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:79493/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:84011/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:248019/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:11017/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:139972/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:152443/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:157032/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:166771/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:19813/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:233391/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:234253/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:371498/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:255380/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:29933/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:324467/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:36626/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:273767/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:357171/71‑1 (MQ=255) ccAATTTCTGTGCAGCCAAAAATGACGCCCCGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:409952/71‑1 (MQ=255)  cAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcgca  <  1:617516/70‑1 (MQ=255)  cAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:343704/70‑1 (MQ=255)  cAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:220499/70‑1 (MQ=255)  cAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:42021/70‑1 (MQ=255)  cAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:420078/70‑1 (MQ=255)   aaTTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:247110/69‑1 (MQ=255)               gCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:268999/57‑1 (MQ=255)                ccAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:61803/56‑1 (MQ=255)                              cTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:588224/42‑1 (MQ=255)                               tgtgCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:329491/41‑1 (MQ=255)                                 tgCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGcaca  <  1:36915/39‑1 (MQ=255)                                                                       | CCAATTTCTGTGCAGCCAAAAATGACGCCCTGTGCGCCCTGTTCTGCAAGGCGAGCAATCACTTGCGCACA  >  minE/1927071‑1927141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑