Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2542151	2542159	9	11 [0]	[0] 40	rfaZ/rfaK	lipopolysaccharide core biosynthesis protein/lipopolysaccharide core biosynthesis

AAAATGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCCTTTC  >  minE/2542160‑2542230 |                                                                       aaaaTGCGCTTAGGAACTTTTCTCAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAAtt         >  1:481674/1‑64 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAACCAAAATCAAGATTAATTTCctttc  >  1:386683/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAAtt         >  1:189903/1‑64 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:49477/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:341066/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:367957/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:371912/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:393312/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:397388/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:413948/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:329532/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:496060/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:526123/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:554726/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:555709/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:559886/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:576797/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:601629/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:653197/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:66471/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:166746/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:109690/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:116430/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:117489/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:121580/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:121781/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:133258/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:14727/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:165464/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:108691/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:17037/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:187297/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:201645/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:206693/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:210991/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:224051/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:280584/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCctttc  >  1:286946/1‑71 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCcttt   >  1:562836/1‑70 (MQ=255) aaaaTGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAAATTCctttc  >  1:285232/1‑71 (MQ=255) |                                                                       AAAATGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCCTTTC  >  minE/2542160‑2542230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑