Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2588359	2588374	16	4 [0]	[0] 44	mdtE	multidrug resistance efflux transporter

GTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTTTC  >  minE/2588375‑2588445 |                                                                       gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCAt                                     >  1:327227/1‑36 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATcg                                   >  1:641702/1‑38 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAAt                        >  1:537314/1‑49 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTAt             >  1:499087/1‑60 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCttt   >  1:164750/1‑70 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:614227/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:482078/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:50171/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:527008/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:551048/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:567625/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:576818/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:599952/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:613936/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:462596/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:623421/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:64303/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:66944/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:76580/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:8340/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:85700/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:86492/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:94329/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:291008/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:161233/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:163815/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:174434/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:176761/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:181363/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:189576/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:212931/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:238572/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:246078/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:290659/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:465241/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:304392/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:348895/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:356074/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:359289/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:379897/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:389620/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:400369/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:448605/1‑71 (MQ=255) gTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTttc  >  1:137054/1‑71 (MQ=255) |                                                                       GTTTTCCGCCGATTTGTCATCGCAGGCGGTGAGCATCGCGCCGCAGAATAACAACGGTATTAACAGCTTTC  >  minE/2588375‑2588445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑