Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2816039	2816102	64	31 [0]	[0] 21	soxS	DNA‑binding transcriptional dual regulator

TCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTT  >  minE/2816103‑2816173 |                                                                       tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGc                               >  1:522409/1‑42 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCa                       >  1:516565/1‑50 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:88540/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:124896/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:75805/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:74799/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:7245/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:645093/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:612266/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:593623/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:583492/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:547840/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:531227/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:522152/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:521842/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:491678/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:477553/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:429776/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:213715/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:20808/1‑71 (MQ=255) tCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGAtttttt  >  1:129723/1‑71 (MQ=255) |                                                                       TCGCCAAGCGTCTGATGCGTCACCGTGCGGAACATTCGTTGCAAGTACCACTTTGAATAGCCTGATTTTTT  >  minE/2816103‑2816173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑