Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	359929	360051	123	29 [0]	[1] 40	sfmD	predicted outer membrane export usher protein

TCTCGGGAACTGGGGCGCAGTGTCGCTGGATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCCTC  >  minE/360025‑360121                            |                                                                      tctcGGGAACTGGGGCGCAGTGTCGCTGGATGTAACGCAt                                                           <  1:344802/40‑1 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAggg                     >  1:544750/1‑51 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:455814/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:345851/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:355622/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:383974/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:40320/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:433010/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:443785/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:443914/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:444905/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:650869/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:471758/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:527647/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:531217/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:533443/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:533853/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:590547/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:650455/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:106023/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:213349/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:109723/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:143060/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:160186/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:160362/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:171514/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:194433/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:207302/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:342306/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:218267/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:225702/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:239838/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:268762/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:293153/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:318180/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:328032/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:330247/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCctc  >  1:341634/1‑70 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCct   >  1:212804/1‑69 (MQ=255)                            ggATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATACTATTCGCTTCctc  >  1:587049/1‑70 (MQ=255)                            |                                                                      TCTCGGGAACTGGGGCGCAGTGTCGCTGGATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCCTC  >  minE/360025‑360121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑