Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1557399	1557474	76	23 [0]	[0] 14	[emrY]	[emrY]

CATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAA  >  minE/1557475‑1557522 |                                                caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:105315/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:203279/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:266689/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:276631/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:353001/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:381105/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:402288/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:490090/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:497887/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:51698/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:550752/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:604381/48‑1 (MQ=255) caTCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGaaaaaa  <  1:84434/48‑1 (MQ=255) caTCAAGATTGGTCGATAGCCTACACATTAATGAAGACAGCGaaaaaa  <  1:494652/48‑1 (MQ=255) |                                                CATCAAGATTGGTCGATAGGCTACACATTAATGAAGACAGCGAAAAAA  >  minE/1557475‑1557522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑