Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1938289	1938361	73	21 [0]	[0] 9	xerD	site‑specific tyrosine recombinase

TGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTC  >  minE/1938362‑1938432 |                                                                       tgctgcGCACGCTGGCTGGGAAACAACACGTCAAtt                                     >  1:277790/1‑36 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:11866/1‑71 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:185133/1‑71 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:188438/1‑71 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:298696/1‑71 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:373816/1‑71 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:439838/1‑71 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:520518/1‑71 (MQ=255) tgctgcGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTc  >  1:647433/1‑71 (MQ=255) |                                                                       TGCTGCGCACGCTGGCTGGGAAACAACACGTCAATTGACACACCATTCAGCAGCCACGGACGCCCATGTTC  >  minE/1938362‑1938432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑