Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2040648	2040659	12	3 [2]	[0] 32	yqiH	predicted periplasmic pilin chaperone

GCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTAA  >  minE/2040660‑2040729 |                                                                      gCCTGGGGTGCCATCATCCCGGATCGTCCCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:202637/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATTAATGAGta                      >  1:38004/1‑49 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGc            >  1:386088/1‑60 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCaa     >  1:578831/1‑66 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:543853/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:377122/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:409151/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:493396/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:49844/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:519703/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:375612/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:560569/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:582355/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:602551/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:641472/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:87503/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:91063/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:10242/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:350416/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:338393/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:27177/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:222938/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:212481/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:19477/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:155229/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:14868/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:136490/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:133750/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:121934/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTaa  >  1:113716/1‑70 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTa   >  1:142720/1‑69 (MQ=255) gCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAAAGAGTCAGACAAAGGCGAAGCATTaa  >  1:254965/1‑70 (MQ=255) |                                                                      GCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGACAAAGGCGAAGCATTAA  >  minE/2040660‑2040729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑