Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | minE | 32,669 | G→A | 100% | G127G (GGC→GGT) | caiE ← | predicted acyl transferase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | minE | 32,669 | 0 | G | A | 100.0% | 16.3 / NA | 7 | G127G (GGC→GGT) | caiE | predicted acyl transferase |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (7/0); total (7/0) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
AACATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCGCCGCGAAAGCCCGCTTTGA > minE/32618‑32688 | aaCATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCACCGCGAAAGCCCGCTTTg > 1:418058/1‑70 (MQ=255) aaCATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCACCGCGAAAGCCCGCTTTGa > 1:271888/1‑71 (MQ=255) aaCATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCACCGCGAAAGCCCGCTTTGa > 1:489335/1‑71 (MQ=255) aaCATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCACCGCGAAAGCCCGCTTTGa > 1:501563/1‑71 (MQ=255) aaCATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCACCGCGAAAGCCCGCTTTGa > 1:50729/1‑71 (MQ=255) aaCATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCACCGCGAAAGCCCGCTTTGa > 1:610595/1‑71 (MQ=255) aaCATAGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCACCGCGAAAGCCCGCTTTGa > 1:83269/1‑71 (MQ=255) | AACATTGCGTACAGCGCGGGCTGGCGTACCCATCAACAACTGGCGTTTCTCGCCGCGAAAGCCCGCTTTGA > minE/32618‑32688 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |