Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | minE | 2,334,270 | G→A | 100% | L573L (CTG→CTA) | fdoG → | formate dehydrogenase‑O, large subunit |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | minE | 2,334,270 | 0 | G | A | 100.0% | 151.2 / NA | 41 | L573L (CTG→CTA) | fdoG | formate dehydrogenase‑O, large subunit |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (0/41); total (0/41) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
CAAAGTGATCGGTTGTCTGTCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTA > minE/2334252‑2334322 | cataGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:474303/68‑1 (MQ=255) caaaGTTATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:235699/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGGAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:386284/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:573116/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:388814/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:38984/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:433408/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:478880/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:482622/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:500411/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:511284/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:525457/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:95750/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:596741/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:600791/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:602242/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:605160/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:609115/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:612542/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:657351/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:110260/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:244340/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:113591/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:157558/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:172057/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:181739/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:182610/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:19165/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:192018/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:24082/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:356993/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:263578/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:268499/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:27197/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:275306/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:277796/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:312149/71‑1 (MQ=255) caaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:319049/71‑1 (MQ=255) caaaGTGATCGGATGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:566569/71‑1 (MQ=255) aaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:253660/70‑1 (MQ=255) aaaGTGATCGGTTGTCTATCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTa < 1:166762/70‑1 (MQ=255) tctatcGTAACTGAAGTTCCTCGTCACCATCGACCCACTTAACACTGAAACCTCTa < 1:407914/56‑1 (MQ=255) | CAAAGTGATCGGTTGTCTGTCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTA > minE/2334252‑2334322 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |