Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	478146	478146	1	2 [0]	[0] 5	cydA	cytochrome d terminal oxidase, subunit I

TCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCGG  >  minE/478100‑478145                                              | tCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCgg  >  1:11177/1‑46 (MQ=255) tCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCgg  >  1:73382/1‑46 (MQ=255)                                              | TCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCGG  >  minE/478100‑478145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑