Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 246163 246235 73 8 [0] [0] 2 phoB DNA‑binding response regulator in two‑component regulatory system with PhoR (or CreC)

CTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGG  >  minE/246102‑246162
                                                            |
cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:117627/61‑1 (MQ=255)
cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:11795/61‑1 (MQ=255)
cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:202114/61‑1 (MQ=255)
cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:357150/61‑1 (MQ=255)
cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:385729/61‑1 (MQ=255)
cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:49005/61‑1 (MQ=255)
cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:491890/61‑1 (MQ=255)
               tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTgg  <  1:315985/46‑1 (MQ=255)
                                                            |
CTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGG  >  minE/246102‑246162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: