Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	943824	943825	2	2 [0]	[0] 3	ddpD	D‑Ala‑D‑Ala transporter subunit

GAAAGATCATCGCCACTCGTGCGCCGCGCCACTGACGAAGCTGTTTTTCCCG  >  minE/943826‑943877 |                                                    gAAAGATCATCGCCACTCGTGCGCCGCGCCACTGACGAAGCTGTTTTTCCcg  >  1:179080/1‑52 (MQ=255) gAAAGATCATCGCCACTCGTGCGCCGCGCCACTGACGAAGCTGTTTTTCCcg  >  1:281403/1‑52 (MQ=255) gAAAGATCATCGCCACTCGTGCGCCGCGCCACTGACGAAGCTGTTTTTCCcg  >  1:456553/1‑52 (MQ=255) |                                                    GAAAGATCATCGCCACTCGTGCGCCGCGCCACTGACGAAGCTGTTTTTCCCG  >  minE/943826‑943877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑