Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1027013	1027015	3	2 [0]	[0] 3	malI/malX	DNA‑binding transcriptional repressor/fused maltose and glucose‑specific PTS enzyme IIBC components

TCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCACGCT  >  minE/1027016‑1027077 |                                                              tCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGTAAACAGCACCGAAAGTCACGCt  >  1:186569/1‑62 (MQ=255) tCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCACGCt  >  1:460513/1‑62 (MQ=255) tCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCACGCt  >  1:552213/1‑62 (MQ=255) |                                                              TCCAGATTGTTCTCTACGAGGAGTCGTTTTATGACGGCGAAAACAGCACCGAAAGTCACGCT  >  minE/1027016‑1027077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑