Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1443345	1443352	8	2 [0]	[0] 3	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

AGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGT  >  minE/1443353‑1443393 |                                         aGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGt  <  1:17065/41‑1 (MQ=255) aGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGt  <  1:369326/41‑1 (MQ=255) aGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGt  <  1:504682/41‑1 (MQ=255) |                                         AGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGT  >  minE/1443353‑1443393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑