Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2343128	2343141	14	3 [0]	[0] 2	glnL	sensory kinase in two‑component regulatory system with GlnG

CGGGCATTCCGCCTCATTTGCAGGATACGCTGTTTTACCCGATGG  >  minE/2343142‑2343186 |                                             cgggcATTCCGCCTCATTTGCAGGATACGCTGTTTTACCCGATgg  >  1:197980/1‑45 (MQ=255) cgggcATTCCGCCTCATTTGCAGGATACGCTGTTTTACCCGATgg  >  1:490104/1‑45 (MQ=255) |                                             CGGGCATTCCGCCTCATTTGCAGGATACGCTGTTTTACCCGATGG  >  minE/2343142‑2343186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑