Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2612447	2612451	5	40 [0]	[0] 8	nikA	nickel transporter subunit

AATGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGA  >  minE/2612377‑2612446                                                                      | aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:280449/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2280530/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1035575/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2287418/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2291011/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2349395/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2423154/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2655482/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2768331/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2281812/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:293519/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:331090/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:3547/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:357722/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:422206/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:544445/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:924235/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:985569/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2205187/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1093267/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1167013/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1200736/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1217753/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1272612/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1337184/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1352061/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1605285/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1689878/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1695165/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1721535/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1790729/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1961970/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:1965656/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2046879/70‑1 (MQ=255) aaTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:208023/70‑1 (MQ=255) aaTCATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:2229514/70‑1 (MQ=255)  aTGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:704939/69‑1 (MQ=255)                       cTTACCGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:596417/48‑1 (MQ=255)                        ttAACGCATCGGGGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:3232357/47‑1 (MQ=255)                              cATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGa  <  1:672718/41‑1 (MQ=255)                                                                      | AATGATTTCCGCCATCGATTTGCTTAACGCATCGGTGCCGATGAACGAAAGTTCAATGCGCAGCGGCTGA  >  minE/2612377‑2612446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑