Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	871881	871894	14	3 [0]	[0] 31	topA	DNA topoisomerase I, omega subunit

ACCACCATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAACGC  >  minE/871895‑871965 |                                                                       accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGATCGTGCTGGAAGGCGAAGATGCTGAAACCAAcg   >  1:1589036/1‑70 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGc                      >  1:1283794/1‑51 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGa                    >  1:49658/1‑53 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:2639569/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:560679/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:560639/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:3231871/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:3196184/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:3192833/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:3168948/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:3117891/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:2709634/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1202547/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:2452948/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:2329575/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1350338/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1967045/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1389437/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:16725/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1656222/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1623640/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1600887/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcg   >  1:942517/1‑70 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcg   >  1:60858/1‑70 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcg   >  1:3100882/1‑70 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcg   >  1:2274538/1‑70 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcg   >  1:2563867/1‑70 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAc    >  1:3223796/1‑69 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGCGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:1296635/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTGATGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcgc  >  1:3292301/1‑71 (MQ=255) accaccATTAACCTGGTGCCGGAAAACGAAGTACTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAAcg   >  1:3146351/1‑70 (MQ=255) |                                                                       ACCACCATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAACGC  >  minE/871895‑871965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑